%0 Conference Paper
%1 2037379
%A Teng Han
%A Jason Alexander
%A Abhijit Karnik
%A Pourang Irani
%A Sriram Subramanian 
%T Kick: investigating the use of kick gestures for mobile interactions
%B Proceedings of the 13th International Conference on Human Computer Interaction with Mobile Devices and Services
%@ 978-1-4503-0541-9
%C Stockholm, Sweden
%P 29-32
%D 2011
%R 10.1145/2037373.2037379
%I ACM

%0 Conference Paper
%1 1979393
%A Izdihar Jamil
%A Kenton O'Hara
%A Mark Perry
%A Abhijit Karnik
%A Sriram Subramanian 
%T The effects of interaction techniques on talk patterns in collaborative peer learning around interactive tables
%B Proceedings of the 2011 annual conference on Human factors in computing systems
%@ 978-1-4503-0228-9
%C Vancouver, BC, Canada
%P 3043-3052
%D 2011
%R 10.1145/1978942.1979393
%I ACM

%0 Conference Paper
%1 2046431
%A Abhijit Karnik
%A Walterio Mayol-Cuevas
%A Sriram Subramanian 
%T MUST-D: multi-user see through display
%B Proceedings of the 24th annual ACM symposium adjunct on User interface software and technology
%@ 978-1-4503-1014-7
%C Santa Barbara, California, USA
%P 77-78
%D 2011
%R 10.1145/2046396.2046431
%I ACM

%0 Conference Paper
%1 1979870
%A Abhijit Karnik
%A Archie Henderson
%A Andrew Dean
%A Howard Pang
%A Thomas Campbell
%A Satoshi Sakurai
%A Guido Herrmann
%A Shahram Izadi
%A Yoshifumi Kitamura
%A Sriram Subramanian 
%T VORTEX: design and implementation of an interactive volumetric display
%B Proceedings of the 2011 annual conference extended abstracts on Human factors in computing systems
%@ 978-1-4503-0268-5
%C Vancouver, BC, Canada
%P 2017-2022
%D 2011
%R 10.1145/1979742.1979870
%I ACM

%0 Conference Paper
%1 2307131
%A Izdihar Jamil
%A Mark Perry
%A Kenton O'Hara
%A Abhijit Karnik
%A Mark T. Marshall
%A Swathi Jha
%A Sanjay Gupta
%A Sriram Subramanian 
%T Group interaction on interactive multi-touch tables by children in India
%B Proceedings of the 11th International Conference on Interaction Design and Children
%@ 978-1-4503-1007-9
%C Bremen, Germany
%P 224-227
%D 2012
%R 10.1145/2307096.2307131
%I ACM

%0 Conference Paper
%1 2208641
%A Abhijit Karnik
%A Walterio Mayol-Cuevas
%A Sriram Subramanian 
%T MUSTARD: a multi user see through AR display
%B Proceedings of the 2012 ACM annual conference on Human Factors in Computing Systems
%@ 978-1-4503-1015-4
%C Austin, Texas, USA
%P 2541-2550
%D 2012
%R 10.1145/2208636.2208641
%I ACM

%0 Conference Paper
%1 2380151
%A Abhijit Karnik
%A Diego Martinez Plasencia
%A Walterio Mayol-Cuevas
%A Sriram Subramanian 
%T PiVOT: personalized view-overlays for tabletops
%B Proceedings of the 25th annual ACM symposium on User interface software and technology
%@ 978-1-4503-1580-7
%C Cambridge, Massachusetts, USA
%P 271-280
%D 2012
%R 10.1145/2380116.2380151
%I ACM

%0 Conference Paper
%1 2470738
%A Anne Roudaut
%A Abhijit Karnik
%A Markus Löchtefeld
%A Sriram Subramanian 
%T Morphees: toward high "shape resolution" in self-actuated flexible mobile devices
%B Proceedings of the SIGCHI Conference on Human Factors in Computing Systems
%@ 978-1-4503-1899-0
%C Paris, France
%P 593-602
%D 2013
%R 10.1145/2470654.2470738
%I ACM

%0 Book Section
%T Dynamic Spatial Positioning: Physical Collaboration around Interactive Table by Children in India
%A Jamil, Izdihar
%A O’Hara, Kenton
%A Perry, Mark
%A Karnik, Abhijit
%A Marshall, Mark T.
%A Jha, Swathi
%A Gupta, Sanjay
%A Subramanian, Sriram
%E Kotzé, Paula
%E Marsden, Gary
%E Lindgaard, Gitte
%E Wesson, Janet
%E Winckler, Marco
%B Human-Computer Interaction – INTERACT 2013: 14th IFIP TC 13 International Conference, Cape Town, South Africa, September 2-6, 2013, Proceedings, Part IV
%D 2013
%I Springer Berlin Heidelberg
%C Berlin, Heidelberg
%@ 978-3-642-40498-6
%F Jamil2013
%R 10.1007/978-3-642-40498-6_11
%U http://dx.doi.org/10.1007/978-3-642-40498-6_11
%P 141-158



%0 Journal Article
%A Karnik, Abhijit
%A Karnik, Rucha
%A Grefen, Christopher
%D 2013
%J BMC Bioinformatics
%N 1
%M doi:10.1186/1471-2105-14-105
%P 105
%T SDM-assist software to design site-directed mutagenesis primers introducing "silent" restriction sites
%U http://www.biomedcentral.com/1471-2105/14/105
%V 14
%@ 1471-2105
%X BACKGROUND:Over the past decades site-directed mutagenesis (SDM) has become an indispensable tool for biological structure-function studies. In principle, SDM uses modified primer pairs in a PCR reaction to introduce a mutation in a cDNA insert. DpnI digestion of the reaction mixture is used to eliminate template copies before amplification in E.coli; however, this process is inefficient resulting in un-mutated clones which can only be distinguished from mutant clones by sequencing.RESULTS:We have developed a program -- 'SDM-Assist' which creates SDM primers adding a specific identifier: through additional silent mutations a restriction site is included or a previous one removed which allows for highly efficient identification of 'mutated clones' by a simple restriction digest.CONCLUSIONS:The direct identification of SDM clones will save time and money for researchers. SDM-Assist also scores the primers based on factors such as Tm, GC content and secondary structure allowing for simplified selection of optimal primer pairs.



%0 Book Section
%T Comparison of User Performance in Mixed 2D-3D Multi-Display Environments
%A Karnik, Abhijit
%A Grossman, Tovi
%A Subramanian, Sriram
%E Kotzé, Paula
%E Marsden, Gary
%E Lindgaard, Gitte
%E Wesson, Janet
%E Winckler, Marco
%B Human-Computer Interaction – INTERACT 2013: 14th IFIP TC 13 International Conference, Cape Town, South Africa, September 2-6, 2013, Proceedings, Part I
%D 2013
%I Springer Berlin Heidelberg
%C Berlin, Heidelberg
%@ 978-3-642-40483-2
%F Karnik2013
%R 10.1007/978-3-642-40483-2_18
%U http://dx.doi.org/10.1007/978-3-642-40483-2_18
%P 260-277

%0 Conference Paper
%1 2557087
%A Sue Ann Seah
%A Diego Martinez Plasencia
%A Peter D. Bennett
%A Abhijit Karnik
%A Vlad Stefan Otrocol
%A Jarrod Knibbe
%A Andy Cockburn
%A Sriram Subramanian 
%T SensaBubble: a chrono-sensory mid-air display of sight and smell
%B Proceedings of the SIGCHI Conference on Human Factors in Computing Systems
%@ 978-1-4503-2473-1
%C Toronto, Ontario, Canada
%P 2863-2872
%D 2014
%R 10.1145/2556288.2557087
%I ACM 

%0 Conference Paper
%1 2647351
%A Diego Martinez Plasencia
%A Florent Berthaut
%A Abhijit Karnik
%A Sriram Subramanian 
%T Through the combining glass
%B Proceedings of the 27th annual ACM symposium on User interface software and technology
%@ 978-1-4503-3069-5
%C Honolulu, Hawaii, USA
%P 341-350
%D 2014
%R 10.1145/2642918.2647351
%I ACM

%0 Conference Paper
%1 2628392
%A Diego Martinez Plasencia
%A Abhijit Karnik
%A Jonatan Martinez Muñoz
%A Sriram Subramanian 
%T Portallax: bringing 3D displays capabilities to handhelds
%B Proceedings of the 16th international conference on Human-computer interaction with mobile devices & services
%@ 978-1-4503-3004-6
%C Toronto, ON, Canada
%P 145-154
%D 2014
%R 10.1145/2628363.2628392
%I ACM

%0 Conference Paper
%1 2702180
%A Yvonne Jansen
%A Pierre Dragicevic
%A Petra Isenberg
%A Jason Alexander
%A Abhijit Karnik
%A Johan Kildal
%A Sriram Subramanian
%A Kasper Hornbæk 
%T Opportunities and Challenges for Data Physicalization
%B Proceedings of the 33rd Annual ACM Conference on Human Factors in Computing Systems
%@ 978-1-4503-3145-6
%C Seoul, Republic of Korea
%P 3227-3236
%D 2015
%R 10.1145/2702123.2702180
%I ACM

%0 Conference Paper
%1 2702604
%A Faisal Taher
%A John Hardy
%A Abhijit Karnik
%A Christian Weichel
%A Yvonne Jansen
%A Kasper Hornbæk
%A Jason Alexander 
%T Exploring Interactions with Physically Dynamic Bar Charts
%B Proceedings of the 33rd Annual ACM Conference on Human Factors in Computing Systems
%@ 978-1-4503-3145-6
%C Seoul, Republic of Korea
%P 3237-3246
%D 2015
%R 10.1145/2702123.2702604
%I ACM 

%0 Conference Paper
%1 2680576
%A Christian Weichel
%A Jason Alexander
%A Abhijit Karnik
%A Hans Gellersen 
%T SPATA: Spatio-Tangible Tools for Fabrication-Aware Design
%B Proceedings of the Ninth International Conference on Tangible, Embedded, and Embodied Interaction
%@ 978-1-4503-3305-4
%C Stanford, California, USA
%P 189-196
%D 2015
%R 10.1145/2677199.2680576
%I ACM

%0 Journal Article
%A Weichel, C.
%A Alexander, J.
%A Karnik, A.
%A Gellersen, H.
%D 2015
%T Connected Tools in Digital Design
%J IEEE Pervasive Computing
%V 14
%N 2
%P 18-21
%! Connected Tools in Digital Design
%@ 1536-1268
%R 10.1109/MPRV.2015.29
%K CAD
computerised instrumentation
measurement systems
SPATA tools
digital design
fabrication-aware design
measurement tools
physical tools
spatio-tangible tools
Data visualization
Digital systems
Fabrication
Internet of things
Printing
Three dimensional displays
Virtualization
Web services
3D printing
Internet/Web technologies
SPATA
pervasive computing
visualization





%0 Conference Proceedings
%A Anne Roudaut
%A Diana Krusteva
%A Abhijit Karnik
%A Mike McCoy 
%A Karthik Ramani
%A Sriram Subramanian 
%D 2016
%T Cubimorph: Designing modular interactive devices
%B 2016 IEEE International Conference on Robotics and Automation (ICRA)
%P 3339-3345
%8 16-21 May 2016
%! Cubimorph: Designing modular interactive devices
%R 10.1109/ICRA.2016.7487508
%K Algorithm design and analysis
Fasteners
Games
Probabilistic logic
Prototypes
Robots
Shape





%0 Journal Article
%1 3058551
%A Izdihar Jamil
%A Calkin Suero Montero
%A Mark Perry
%A Kenton O’Hara
%A Abhijit Karnik
%A Kaisa Pihlainen
%A Mark T. Marshall
%A Swathi Jha
%A Sanjay Gupta
%A Sriram Subramanian 
%T Collaborating around Digital Tabletops: Children's Physical Strategies from India, the UK and Finland
%J ACM Trans. Comput.-Hum. Interact.
%@ 1073-0516
%V 24
%N 3
%P 1-30
%D 2017
%R 10.1145/3058551
%I ACM

%0 Conference Proceedings
%A Karnik, A.
%A Dembo, P.
%A Alexander, J.
%A Yap, K. M.
%A Wong, H. J.
%D 2018
%T FingerSlide: Investigating Passive Haptic Sliding as a Tacton Channel
%B 2018 IEEE International Symposium on Haptic, Audio and Visual Environments and Games (HAVE)
%P 1-6
%8 20-21 Sept. 2018
%! FingerSlide: Investigating Passive Haptic Sliding as a Tacton Channel
%R 10.1109/HAVE.2018.8547484
%K Haptic interfaces
Thumb
Surface texture
Prototypes
Piezoelectric transducers
Surface topography
passive sliding
user study





%0 Journal Article
%T Point of Contact: Investigating Change in Perception through a Serious Game for COVID-19 Preventive Measures
%V 5
%U https://doi.org/10.1145/3474701
%R 10.1145/3474701
%N CHI PLAY
%J Proc. ACM Hum.-Comput. Interact.
%I Association for Computing Machinery
%A Joshua Hill
%A Edward Corke
%A Mubarak Salawu
%A Ethan Cotterell
%A Matthew Russell
%A Joshua Gibbons
%A Tianxiang Mu
%A Abhijit Karnik
%D 2021
%P Article 274
%K serious games, game transfer phenomena, covid-19